2. Publications

Publications

Lagrangian Flow Network approach to an open flow model

Ser-Giacomi, E.; Rodriguez-Mendez, V.; Lopez, C.; Hernandez-Garcia, E.
European Physical Journal - Special Topics 226, 2057-2068 (2017)

Introduction to Focus Issue: Complex network perspectives on flow systems

Donner, Reik V. ; Hernandez-Garcia, Emilio; Ser-Giacomi, Enrico
Chaos 27, 035601 (1-5) (2017)

Clustering coefficient and periodic orbits in flow networks

Rodriguez-Mendez, V.; Ser-Giacomi, E.; Hernandez-Garcia, E.
Chaos 27, 035803 (1-9) (2017)

Sensitivity and robustness of larval connectivity diagnostics obtained from Lagrangian Flow Networks

Monroy, Pedro; Rossi,Vincent; Ser-Giacomi,Enrico; López, Cristóbal; Hernández-García,Emilio
ICES Journal of Marine Science 74, 1763-1779 (2017)

Lagrangian Flow Networks: a new framework to study the multi-scale connectivity and the structural complexity of marine populations

Rossi, Vincent; Ser-Giacomi, Enrico; Dubois, Mélodie; Monroy, Pedro; Hidalgo, Manuel; Hernandez-García, Emilio; López, Cristobal
In CIESM Workshop Monograph 48: Marine connectivity - migration and larval dispersal, Edited by F. Briand (http://www.ciesm.org/online/monographs/Soller16.html), CIESM Publisher, Monaco, 39-51 (2016)

Pattern formation with repulsive soft-core interactions: Discrete particle dynamics and Dean-Kawasaki equation

Delfau, Jean-Baptiste; Ollivier, Hélène; López, Cristóbal; Blasius, Bernd; Hernández-García, Emilio
Physical Review E 94, 042120 (1-13) (2016)

Pattern formation in clonal plants

Schönsberg, Francesca (Supervisors: Gomila, D. and Hernandez-Garcia, E.)
Master Thesis (2016)

Network properties of genotype-phenotype mappings

de la Fuente, Rebeca (Supervisor: Hernandez-Garcia, Emilio)
Master Thesis (2016)

Interdecadal Variability of Southeastern South America Rainfall and Moisture Sources during the Austral Summertime

Martin-Gomez, V.; Hernandez-Garcia, E.; Barreiro, M.; Lopez, C.
Journal of Climate 29, 6751-6763 (2016)

Percolation-based precursors of transitions in extended systems

Rodriguez-Mendez, Victor; Eguiluz, Victor M.; Hernandez-Garcia, Emilio; Ramasco, Jose J.
Scientific Reports 6, 29552 (1-10) (2016)

Linking basin-scale connectivity, oceanography and population dynamics for the conservation and management of marine ecosystems

Dubois, M.; Rossi, V.; Ser-Giacomi, E.; Arnaud-Haond, S.; Lopez, C.; Hernandez-Garcia, E.
Global Ecology and Biogeography 25, 503-515 (2016)

Correlation networks from flows. The case of forced and time-dependent advection-diffusion dynamics

Tupikina, L.; Molkenthin, N.; Lopez, C.; Hernandez-Garcia, E.; Marwan, N.; Kurths, J.
PLoS One 11, e0153703 (1-12) (2016)

Semantic Space as a Metapopulation System: Modelling the Wikipedia Information Flow Network

Masucci, A.Paolo; Kalampokis, Alkiviadis; Eguíluz, Víctor M.; Hernández-García, Emilio
Towards a Theoretical Framework for Analyzing Complex Linguistic Networks (edited by A. Mehler, A. Lücking, S. Banisch, Ph. Blanchard and B. Job), Springer (Berlin, Heidelberg), 133-151 (2016)

A complex network theory approach to oceanic and atmospheric transport phenomena

Ser-Giacomi, Enrico (Supervisors: Hernandez-García, Emilio; López, Cristóbal)
PhD Thesis (2015)

Constructive effects of diversity in a multi-neuron model of the homeostatic regulation of the sleep-wake cycle

Patriarca, Marco; Hernandez-Garcia, Emilio; Toral, Raul
Chaos, Solitons and Fractals 81, part B, 567-574 (2015)

Boundaries of the Peruvian Oxygen Minimum Zone shaped by coherent mesoscale dynamics

Bettencourt, J.H.; López, C.; Hernández-García, E.; Montes, I.; Sudre, J.; Dewitte, B; Paulmier A.; Garçon, V.
Nature Geoscience 8, 937-940 (2015)

Dominant transport pathways in an atmospheric blocking event

Ser-Giacomi, Enrico; Vasile, Ruggero; Recuerda, Irene; Hernandez-Garcia, Emilio; Lopez, Cristobal
Chaos 25, 087413 (1-10) (2015)

Most probable paths in temporal weighted networks: An application to ocean transport

Ser-Giacomi, Enrico; Vasile, Ruggero; Hernandez-Garcia, Emilio; Lopez, Cristobal
Physical Review E 92, 012818 (1-6) (2015)

Pattern Formation in Populations with Density-Dependent Movement and Two Interaction Scales

Martínez-García, Ricardo; Murgui, Clara; Hernández-García, Emilio; López, Cristóbal
Plos One 10, e0132261 (1-14) (2015)

Spatial patterns of competing random walkers

Hernandez-Garcia, E.; Heinsalu, E., Lopez, C.
Ecological Complexity 21, 166-176 (2015)

Flow networks: A characterization of geophysical fluid transport

Ser-Giacomi, Enrico; Rossi, Vincent; Lopez, Cristobal; Hernandez-Garcia, Emilio
Chaos 25, 036404 (1-18) (2015)

Anomalous scaling in an age-dependent branching model

Keller-Schmidt, S.; Tugrul, M.; Eguiluz, V.M.; Hernandez-Garcia, E.; Klemm, K.
Physical Review E 91, 022803 (1-6) (2015)

Three Dimensional Lagrangian Structures in Turbulent Flows: Application to Oceanic Processes

Bettencourt, Joao (Supervisors: López, Cristóbal; Hernández-García, Emilio)
PhD Thesis , (2014)

Evolution of movement strategies under competitive interactions

Kiziridis, Danis (Supervisors: Hernández-García, Emilio; López, Cristóbal)
Master Thesis , (2014)

Lagrangian study of an atmospheric blocking event

Recuerda, Irene (Supervisors: Hernández-García, Emilio; López, Cristóbal )
Master Thesis , (2014)

Minimal mechanisms for vegetation patterns in semiarid regions

Martinez-Garcia, Ricardo; Calabrese, Justin M.; Hernandez-Garcia, Emilio; Lopez, Cristobal
Philosophical Transactions of the Royal Society A 372, 20140068 (1-11) (2014)

Disentangling the influence of mutation and migration in clonal seagrasses using the Genetic Distance Spectrum for microsatellites

Arnaud-Haond, S.; Moalic, Y.; Hernandez-Garcia, E.; Eguiluz, V.M.; Filipe, A.; Serrao, E.A.; Duarte, C.M.
Journal of Heredity 105, 532-541 (2014)

Hydrodynamic provinces and oceanic connectivity from a transport network help designing marine reserves

Rossi, Vincent; Ser-Giacomi, Enrico; Lopez, Cristobal, Hernandez-Garcia, Emilio
Geophysical Research Letters 41, 2883-2891 (2014)

Self-localized states in species competition

Paulau, Pavel V.; Gomila, Damià; López, Cristóbal; Hernández-García, Emilio
Physical Review E 89, 032724 (1-8) (2014)

Exploring the tug of war between positive and negative interactions among savanna trees: Competition, dispersal, and protection from fire

Bacelar, F.S.; Calabrese, J.M.; Hernandez-Garcia, E.
Ecological Complexity 17, 140-148 (2014)

The reduction of plankton biomass induced by mesoscale stirring: a modeling study in the Benguela upwelling

Hernández-Carrasco, Ismael; Rossi, Vincent; Hernández-García, Emilio; Garçon, Veronique; López, Cristóbal
Deep-Sea Research Part I 83, 65-80 (2014)

The noisy Hegselmann-Krause model for opinion dynamics

Pineda, Miguel; Toral, Raul; Hernandez-Garcia, Emilio
European Physical Journal B 86, 490 (1-10) (2013)

Vegetation pattern formation in semiarid systems without facilitative mechanisms

Martínez-García, Ricardo; Calabrese, Justin M.; Hernández-García, Emilio; López, Cristóbal
Geophysical Research Letters 40, 6143-6147 (2013)

Lagrangian transport in a microtidal coastal area: the Bay of Palma, island of Mallorca, Spain

Hernández-Carrasco, Ismael; López, Cristóbal; Orfila, Alejandro; Hernández-García, Emilio
Nonlinear Processes in Geophysics 20, 921-933 (2013)

Clustering determines who survives for competing Brownian and Levy walkers

Heinsalu, Els; Hernandez-Garcia, Emilio; Lopez, Cristobal
Physical Review Letters 110, 258101 (1-5) (2013)

Interaction network based early warning indicators for the Atlantic MOC collapse

van der Mheen, M.; Dijkstra, H.A.; Gozolchiani, A.; den Toom, M.; Feng, Q; Kurths, J.; Hernandez-Garcia, E.
Geophysical Research Letters 40, 2714-2719 (2013)

Characterization of coherent structures in three-dimensional turbulent flows using the finite-size Lyapunov exponent

Bettencourt, Joao; Lopez, Cristobal; Hernandez-Garcia, Emilio;
Journal of Physics A 46, 254022 (1-20) (2013)

Horizontal Transport and Mixing and their connection with Dynamical and Biological Processes in the Ocean.

Hernández-Carrasco, Ismael (Supervisors: López, Cristóbal and Hernández-García, Emilio)
PhD Thesis (2013)

50 años del efecto mariposa

Mirasso, Claudio R.; Hernandez-Garcia, Emilio
ENKI. Revista Cientifico-Cultural, Marzo, 54-58 (2013)

Synchronization, quantum correlations and entanglement in oscillator networks

Manzano, Gonzalo; Galve, Fernando; Giorgi, Gian Luca; Hernandez-Garcia, Emilio; Zambrini, Roberta
Scientific Reports 3, 1439 (1-6) (2013)

Genetic flow directionality and geographical segregation in Cymodocea Nodosa genetic diversity network

Masucci, A. Paolo; Arnaud-Haond, Sophie; Eguiluz, Victor M.; Hernandez-Garcia, Emilio; Serrao, Ester A.
EPJ Data Science 1, 11 (1-11) (2012)

Seasonal and regional characterization of horizontal mixing in the global ocean

Hernández-Carrasco, Ismael; López, Cristóbal; Hernández-García, Emilio; Turiel, Antonio.
Journal of Geophysical Research 117, C10007 (1-12) (2012)

Diversity and noise effects in a model of homeostatic regulation of the sleep-wake cycle

Patriarca, M.; Postnova, S.; Braun, H.A.; Hernandez-Garcia, E.; Toral, R.
PLoS Computational Biology 8, e1002650 (1-17) (2012)

Oceanic three-dimensional Lagrangian Coherent Structures: A study of a mesoscale eddy in the Benguela upwelling region.

Bettencourt, Joao; López, Cristóbal; Hernández-García, Emilio
Ocean Modelling 51, 73-83 (2012)

Competitive Brownian and Levy walkers

Heinsalu, E.; Hernandez-Garcia, E.; Lopez, C.
Physical Review E 85, 041105 (1-10) (2012)

Scaling properties of protein family phylogenies

Herrada, E.A.; Eguíluz, V.M.; Hernández-García, E.; Duarte, C.M.
BMC Evolutionary Biology 11, 155 (1-9) (2011)

Wikipedia information flow analysis reveals the scale-free architecture of the Semantic Space

Masucci, A.P.; Kalampokis, A.; Eguíluz, V.M.; Hernández-García, E.
PLoS ONE 6, e17333 (2011)

Extracting directed information flow networks: an application to genetics and semantics

Masucci, A.P.; Eguíluz, V.M.; Hernández-Garcia, E.; Kalampokis, A.;
Physical Review E 83, 026103 (1-6) (2011)

Synchronization and entrainment of coupled circadian oscillators

Komin, Niko; Murza, Adrian C.; Hernandez-Garcia, Emilio; Toral , Raul
Interface Focus 1, 167-176 (2011)

A Complex Network Approach to Phylogenetic Trees: From Genes to the Tree of Life

Herrada, E.A. (Directors: Emilio Hernández-García, Víctor M. Eguíluz and Carlos M. Duarte.)
PhD Thesis (2011)

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